“Papers of School of Biological Sciences”


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  51. M. Shahdoust, H. Mahjub, H. Pezeshk and M. Sadeghi,
A Network-based Comparison between Molecular Apocrine Breast Cancer Tumors and Basal and Luminal Tumors by Joint Graphical Lasso,
computational biology and bioinformatics DOI: 10.1109/TCBB.2019.2911074(2019),   [abstract]

   52. A. Emdadi, F. Ahmadi Moughari, F. Yassaee Meybodi and Ch. Eslahchi,
A novel algorithm for parameter estimation of Hidden Markov Model inspired by Ant Colony Optimization,
Heliyon 5(2019), https://doi.org/10.1016/j.heliyon.2019.e01299  [abstract]

   53. M. Ashtiani, P. Nickchi, S. Jahangiri Tazehkand, A. Saffari, M. Mirzaei and M. Jafari,
IMMAN: an R/Bioconductor package for Interolog protein network reconstruction, mapping and mining analysis,
BMC Bioinformatics 20(2019), 73  [abstract]

   54. T. Baghfalaki and M. Ganjali,
A transition model for analyzing multivariate longitudinal data using Gaussian copula approach,
Advances in Statistical Analysis https://doi.org/10.1007/s10182-018-00346-w(2019), 1-55  [abstract]

   55. S. A. Malekpour, P. Pakzad, M. H. Foroughmand-Araabi, S. Goliaei, R. Tusserkani, B. Goliaei and M. Sadeghi,
Modeling the probability distribution of the bacterial burst size via a game-theoretic approach,
Journal of bioinformatics and computational biology 16(2018), https://doi.org/10.1142/S0219720018500129  [abstract]

   56. D. Molina-Garcia, T. Sandev, H. Safdari, G. Pagnini, A. Chechkin and R. Metzler,
Crossover from anomalous to normal diffusion: truncated power-law noise correlations and applications to dynamics in lipid bilayers,
New Journal of Physics 20(2018), https://doi.org/10.1088/1367-2630/aae4b2  [abstract]

   57. S. Abbasi, S. Gharaghani, A. Benvidi and A. M. Latif,
Identifying the novel natural antioxidants by coupling different feature selection methods with nonlinear regressions and gas chromatography-mass spectroscopy,
Microchemical Journal 139(2018), 372-379 - https://doi.org/10.1016/j.microc.2018.03.012  [abstract]

   58. H. Pezeshgi Modarres, M. R. Mofrad and A. Sanati-Nezhad,
ProtDataTherm: A database for thermostability analysis and engineering of proteins,
PlosOne 13(2018), doi: 10.1371/journal.pone.0191222  [abstract]

   59. Y. Asgari, Z. Zabihinpour and A. Masoudi-Nejad,
SCAN-Toolbox: Structural COBRA Add-oN (SCAN) for Analysing Large Metabolic Networks,
Current Bioinformatics 13(2018), 100-107 - DOI: https://doi.org/10.2174/1574893611666161123123729  [abstract]

   60. F. Salari, F. Zare-Mirakabad, M. Sadeghi and H. Rokni-Zadeh,
Assessing the impact of exact reads on reducing the error rate of read mapping,
BMC Bioinformatics 19(2018), 406 - https://doi.org/10.1186/s12859-018-2432-7  [abstract]

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